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Molecular detection of northern leatherside chub (Lepidomeda copei) DNA in environmental samples

Posted date: April 10, 2018
Publication Year: 
2018
Publication Series: 
Scientific Journal (JRNL)
Source: Western North American Naturalist. 78: 92-99.

Abstract

The northern leatherside chub (Lepidomeda copei) is a cyprinid fish native to the Snake River, Green River, and Bonneville basins of the western United States. Population declines prompted the development of a multistate conservation agreement and strategy, which emphasized the need to reliably delineate its current distribution and monitor its status. To facilitate species monitoring, we developed a quantitative PCR assay to detect northern leatherside chub DNA in environmental samples. The assay consistently detected northern leatherside chub DNA in concentrations as low as 2 copies per reaction and did not amplify DNA of potentially sympatric fish species. The assay amplified a synthetic DNA template representing 3 congeneric species: White River spinedace (L. albivallis), Virgin spinedace, (L. mollispinis mollispinis), and Big Spring spinedace, (L. m. pratensis); however, none of these are sympatric with northern leatherside chub. Field tests of the assay accurately reproduced expected patterns of species occupancy.

Citation

Dysthe, Joseph C.; Carim, Kellie J.; Franklin, Thomas W.; Kikkert, Dave; Young, Michael K.; McKelvey, Kevin S.; Schwartz, Michael K. 2018. Molecular detection of northern leatherside chub (Lepidomeda copei) DNA in environmental samples. Western North American Naturalist. 78: 92-99.